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Hassan Hijazi


Last seen: 4 years ago Active since 2020

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In Simbiology, how to analyze sensitivity analysis?
How to make the most out of the sensitivity analysis? is it enough to just look at the bargraphs and specifying the one(s) with...

4 years ago | 1 answer | 0

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Question


In Simbiology, is it possible to run stochastic simulations with Gillespie’s algorithm?
I haven't found an option for stochastic simulation in the simulation tab? What are other options to run such kind of simulation...

4 years ago | 1 answer | 0

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Question


Is it possible to normalize the output using GUI?
Let us say you have x that yeilds y. In the simulation you want to visualize the fraction of conversion: y/x+y i.e the converted...

4 years ago | 1 answer | 0

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In Simbiology, how to graphically represent an enzyme production and its activity simultaneously?
my serine recombinase s expressed on a plasmid. its substrate (dna sequence flanked by it two recombinase attachment site) is ...

4 years ago | 1 answer | 0

1

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Question


In Simbiology, Is there a way to set a slider with an integer scaling?
When you are simulating, you have the option to vary the quantity of either species or of the rate that you already set by dragg...

4 years ago | 1 answer | 0

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What is the difference between BoundaryCondition and ConstantAmount?
what will change if only Boundary Condition is set true whereas ConstantValue is set false during a simulation? Are they inclus...

4 years ago | 1 answer | 0

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