To explain the issue, I am using the example found here:
https://www.mathworks.com/help/matlab/ref/bar3.html#bt1bonh
The code to create the bar charts is:
% Close existing plots
close all
load count.dat
Z = count(1:10,:);
% Plot bar graph
figure
b = bar3(Z);
title('Semi-Transparent BarGraph')
After creating the plot you can make the plots transparent by modifying the 'FaceAlpha' property of each group of bar charts in the bar3d object:
% For each surface in bar graph - Loop through % Set FaceAlpha to 0.3 % Face Alpha controls transparency of surface % 0 is completely transparent while 1 is opaque for i = 1:length(b) b(i).FaceAlpha = '0.3'; end
In addition, here is further information on changing the colors of the each group of bars individually:
https://www.mathworks.com/matlabcentral/answers/5424-how-to-colorize-individual-bar-in-bar3
Alternatively, you can set a different palette using the "colormap" command: