Tools for NIfTI and ANALYZE image: All Files - File Exchange

Code covered by the BSD License

Highlights from
Tools for NIfTI and ANALYZE image

affine(old_img, old_M, new_el... Using 2D or 3D affine matrix to rotate, translate, scale, reflect and
bipolar(M, lo, hi, contrast) BIPOLAR returns an M-by-3 matrix containing a blue-red colormap, in
bresenham_line3d(P1, P2, prec... Generate X Y Z coordinates of a 3D Bresenham's line between
clip_nii(nii, opt) CLIP_NII: Clip the NIfTI volume from any of the 6 sides
collapse_nii_scan(scan_patter... Collapse multiple single-scan NIFTI files into a multiple-scan NIFTI file
expand_nii_scan(filename, img... Expand a multiple-scan NIFTI file into multiple single-scan NIFTI files
extra_nii_hdr(hdr) Decode extra NIFTI header information into hdr.extra
flip_lr(original_fn, flipped_... When you load any ANALYZE or NIfTI file with 'load_nii.m', and view
get_nii_frame(filename) Return time frame of a NIFTI dataset. Support both *.nii and
load_nii(filename, img_idx, d...
load_nii_ext(filename) Load NIFTI header extension after its header is loaded using load_nii_hdr.
load_nii_hdr(fileprefix) internal function
load_nii_hdr(fileprefix, mach... internal function
load_nii_hdr(fileprefix, mach... internal function
load_nii_img(hdr,filetype,fil... internal function
load_untouch_header_only(file... Load NIfTI / Analyze header without applying any appropriate affine
load_untouch_nii(filename, im... Load NIFTI or ANALYZE dataset, but not applying any appropriate affine
load_untouch_nii_img(hdr,file... internal function
make_ana(varargin) Make ANALYZE 7.5 data structure specified by a 3D or 4D matrix.
make_nii(varargin) Make NIfTI structure specified by an N-D matrix. Usually, N is 3 for
mat_into_hdr(files) MAT_INTO_HDR The old versions of SPM (any version before SPM5) store
reslice_nii(old_fn, new_fn, v... The basic application of the 'reslice_nii.m' program is to perform
rri_file_menu(action, varargi... Imbed a file menu to any figure. If file menu exist, it will append
rri_orient(nii, varargin) Convert image of different orientations to standard Analyze orientation
rri_orient_ui(varargin) Return orientation of the current image:
rri_select_file(varargin)
rri_xhair(varargin) rri_xhair: create a pair of full_cross_hair at point [x y] in
rri_zoom_menu(fig) Imbed a zoom menu to any figure.
save_nii(nii, fileprefix, old...
save_nii_ext(ext, fid) Save NIFTI header extension.
save_nii_hdr(hdr, fid) internal function
save_nii_hdr(hdr, fid) internal function
save_nii_hdr(hdr, fid) internal function
save_untouch_nii(nii, filenam... Save NIFTI or ANALYZE dataset that is loaded by "load_untouch_nii.m".
save_untouch_slice(slice, fil... Save back to the original image with a portion of slices that was
unxform_nii(nii, inblock) Undo the flipping and rotations performed by xform_nii; spit back only
verify_nii_ext(ext) Verify NIFTI header extension to make sure that each extension section
view_nii(varargin)
view_nii_menu(fig, varargin) Imbed Zoom, Interp, and Info menu to view_nii window.
xform_nii(nii, tolerance, pre... internal function
View all files

from Tools for NIfTI and ANALYZE image by Jimmy Shen
Load, save, make, reslice, view (and edit) both NIfTI and ANALYZE data on any platform

All files for Tools for NIfTI and ANALYZE image

/affine.m
/bipolar.m
/bresenham_line3d.m
/clip_nii.m
/collapse_nii_scan.m
/examples.txt
/expand_nii_scan.m
/extra_nii_hdr.m
/flip_lr.m
/get_nii_frame.m
/load_nii.m
/load_nii_ext.m
/load_nii_hdr.m
/load_nii_img.m
/load_untouch0_nii_hdr.m
/load_untouch_header_only.m
/load_untouch_nii.m
/load_untouch_nii_hdr.m
/load_untouch_nii_img.m
/make_ana.m
/make_nii.m
/mat_into_hdr.m
/reslice_nii.m
/rri_file_menu.m
/rri_orient.m
/rri_orient_ui.m
/rri_select_file.m
/rri_xhair.m
/rri_zoom_menu.m
/save_nii.m
/save_nii_ext.m
/save_nii_hdr.m
/save_untouch0_nii_hdr.m
/save_untouch_nii.m
/save_untouch_nii_hdr.m
/save_untouch_slice.m
/unxform_nii.m
/verify_nii_ext.m
/view_nii.m
/view_nii_menu.m
/xform_nii.m

Highlights from Tools for NIfTI and ANALYZE image

Highlights from
Tools for NIfTI and ANALYZE image